{
  "_id": "6a1ef902b401979e73417f00",
  "Package": "expDB",
  "Type": "Package",
  "Title": "Database for Experiment Dataset",
  "Version": "0.3.0",
  "Maintainer": "Bangyou Zheng <bangyou.zheng@csiro.au>",
  "Authors@R": "person(\"Bangyou\", \"Zheng\", \nemail = \"bangyou.zheng@csiro.au\",\nrole = c(\"aut\", \"cre\"))",
  "Description": "A 'SQLite' database is designed to store all information\nof experiment-based data including metadata, experiment design,\nmanagements, phenotypic values and climate records. The dataset\ncan be imported from an 'Excel' file.",
  "License": "MIT + file LICENSE",
  "URL": "https://expdb.bangyou.me/, https://github.com/byzheng/expdb",
  "BugReports": "https://github.com/byzheng/expdb/issues",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Config/pak/sysreqs": "libicu-dev libpng-dev",
  "Repository": "https://byzheng.r-universe.dev",
  "Date/Publication": "2025-09-23 11:52:53 UTC",
  "RemoteUrl": "https://github.com/byzheng/expdb",
  "RemoteRef": "HEAD",
  "RemoteSha": "9e0a9c568664a6fec62e78744242294ad94ffee1",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-19 05:54:02 UTC",
    "User": "root"
  },
  "Author": "Bangyou Zheng [aut, cre]",
  "MD5sum": "132545e789139467ee8397e61d5827f4",
  "_user": "byzheng",
  "_type": "src",
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  "_created": "2026-05-19T05:54:02.000Z",
  "_published": "2026-06-02T15:38:42.645Z",
  "_distro": "noble",
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    "author": "Bangyou Zheng <zheng.bangyou@gmail.com>",
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    "approx_zadoks",
    "dbAddDesigns",
    "dbAddFertilization",
    "dbAddGene",
    "dbAddGeneAllele",
    "dbAddGenotype",
    "dbAddIrrigatons",
    "dbAddLog",
    "dbAddMethods",
    "dbAddMets",
    "dbAddNodes",
    "dbAddPhenotype",
    "dbAddResearcher",
    "dbAddSites",
    "dbAddSource",
    "dbAddTraits",
    "dbAddTrials",
    "dbAddTrialSoil",
    "dbAddWeather",
    "dbExportMet",
    "dbGenotypeCheckName",
    "dbGetDryWeightPerStem",
    "dbGetFertilization",
    "dbGetFieldMaturity",
    "dbGetFieldPopulation",
    "dbGetFieldStemNumber",
    "dbGetFieldTillerNumber",
    "dbGetGene",
    "dbGetGenotype",
    "dbGetIrrigation",
    "dbGetLog",
    "dbGetMetInfo",
    "dbGetOrganFinalLeafNumber",
    "dbGetOrganHaunIndex",
    "dbGetPhenotype",
    "dbGetPlantFlowering",
    "dbGetPlantHeading",
    "dbGetPlantStemElongation",
    "dbGetPlantStemNumber",
    "dbGetPlantTillerNumber",
    "dbGetSites",
    "dbGetSource",
    "dbGetTraits",
    "dbGetTrials",
    "dbGetWeather",
    "dbGetZadoksStage",
    "dbImportXLSX",
    "dbListTrials",
    "expdbConnect",
    "expdbCreateDB",
    "expdbDisconnect",
    "harvestQuadratDetail"
  ],
  "_help": [
    {
      "page": "approx_zadoks",
      "title": "Approximate Date for a Target Zadoks Stage",
      "topics": [
        "approx_zadoks"
      ]
    },
    {
      "page": "dbAddDesigns",
      "title": "Add design for a trial",
      "topics": [
        "dbAddDesigns"
      ]
    },
    {
      "page": "dbAddFertilization",
      "title": "Insert or Update fertilization into expDB",
      "topics": [
        "dbAddFertilization"
      ]
    },
    {
      "page": "dbAddGene",
      "title": "Add gene information into database",
      "topics": [
        "dbAddGene"
      ]
    },
    {
      "page": "dbAddGeneAllele",
      "title": "Add gene allele information into database",
      "topics": [
        "dbAddGeneAllele"
      ]
    },
    {
      "page": "dbAddGenotype",
      "title": "Add genotypes into expDB",
      "topics": [
        "dbAddGenotype"
      ]
    },
    {
      "page": "dbAddIrrigatons",
      "title": "Insert or Update irrigation into expDB",
      "topics": [
        "dbAddIrrigatons"
      ]
    },
    {
      "page": "dbAddLog",
      "title": "Add log from expDB",
      "topics": [
        "dbAddLog"
      ]
    },
    {
      "page": "dbAddMethods",
      "title": "Insert or Update methods into expDB",
      "topics": [
        "dbAddMethods"
      ]
    },
    {
      "page": "dbAddMets",
      "title": "Insert and update met into expDB",
      "topics": [
        "dbAddMets"
      ]
    },
    {
      "page": "dbAddNodes",
      "title": "Add nodes into expDB",
      "topics": [
        "dbAddNodes"
      ]
    },
    {
      "page": "dbAddPhenotype",
      "title": "Add design for a trial",
      "topics": [
        "dbAddPhenotype"
      ]
    },
    {
      "page": "dbAddResearcher",
      "title": "Insert and update researcher into expDB",
      "topics": [
        "dbAddResearcher"
      ]
    },
    {
      "page": "dbAddSites",
      "title": "Insert or update site into expDB",
      "topics": [
        "dbAddSites"
      ]
    },
    {
      "page": "dbAddSource",
      "title": "Insert and update source into expDB",
      "topics": [
        "dbAddSource"
      ]
    },
    {
      "page": "dbAddTraits",
      "title": "Insert or update trait into expDB",
      "topics": [
        "dbAddTraits"
      ]
    },
    {
      "page": "dbAddTrials",
      "title": "Insert or Update trial into expDB",
      "topics": [
        "dbAddTrials"
      ]
    },
    {
      "page": "dbAddTrialSoil",
      "title": "Add soil for a trial",
      "topics": [
        "dbAddTrialSoil"
      ]
    },
    {
      "page": "dbAddWeather",
      "title": "Add weather records into expDB",
      "topics": [
        "dbAddWeather"
      ]
    },
    {
      "page": "dbAppendTable",
      "title": "Append a table into db and check the column name",
      "topics": [
        "dbAppendTable"
      ]
    },
    {
      "page": "dbExportMet",
      "title": "Export trials weather records to met file",
      "topics": [
        "dbExportMet"
      ]
    },
    {
      "page": "dbGenotypeCheckName",
      "title": "Check genotype names",
      "topics": [
        "dbGenotypeCheckName"
      ]
    },
    {
      "page": "dbGetDryWeightPerStem",
      "title": "Get the dry weight per stem",
      "topics": [
        "dbGetDryWeightPerStem"
      ]
    },
    {
      "page": "dbGetFertilization",
      "title": "Get fertilization from database",
      "topics": [
        "dbGetFertilization"
      ]
    },
    {
      "page": "dbGetFieldMaturity",
      "title": "Estimation of maturity",
      "topics": [
        "dbGetFieldMaturity"
      ]
    },
    {
      "page": "dbGetFieldPopulation",
      "title": "Estimation of plant populations",
      "topics": [
        "dbGetFieldPopulation"
      ]
    },
    {
      "page": "dbGetFieldStemNumber",
      "title": "Estimation of stem number per unit area",
      "topics": [
        "dbGetFieldStemNumber"
      ]
    },
    {
      "page": "dbGetFieldTillerNumber",
      "title": "Estimation of tiller number per unit area",
      "topics": [
        "dbGetFieldTillerNumber"
      ]
    },
    {
      "page": "dbGetGene",
      "title": "Get the gene information",
      "topics": [
        "dbGetGene"
      ]
    },
    {
      "page": "dbGetGenotype",
      "title": "Get the genotype information",
      "topics": [
        "dbGetGenotype"
      ]
    },
    {
      "page": "dbGetIrrigation",
      "title": "Get irrigation from database",
      "topics": [
        "dbGetIrrigation"
      ]
    },
    {
      "page": "dbGetLog",
      "title": "Get log from expDB",
      "topics": [
        "dbGetLog"
      ]
    },
    {
      "page": "dbGetMetInfo",
      "title": "Get met information",
      "topics": [
        "dbGetMetInfo"
      ]
    },
    {
      "page": "dbGetOrganFinalLeafNumber",
      "title": "Get the final leaf number",
      "topics": [
        "dbGetOrganFinalLeafNumber"
      ]
    },
    {
      "page": "dbGetOrganHaunIndex",
      "title": "Get Haun Index",
      "topics": [
        "dbGetOrganHaunIndex"
      ]
    },
    {
      "page": "dbGetPhenotype",
      "title": "Get phenotype values through a group of conditions",
      "topics": [
        "dbGetPhenotype"
      ]
    },
    {
      "page": "dbGetPlantFlowering",
      "title": "Estimation of flowering time",
      "topics": [
        "dbGetPlantFlowering"
      ]
    },
    {
      "page": "dbGetPlantHeading",
      "title": "Estimation of heading time",
      "topics": [
        "dbGetPlantHeading"
      ]
    },
    {
      "page": "dbGetPlantStemElongation",
      "title": "Estimation of stem elongation",
      "topics": [
        "dbGetPlantStemElongation"
      ]
    },
    {
      "page": "dbGetPlantStemNumber",
      "title": "Estimation of stem number per plant",
      "topics": [
        "dbGetPlantStemNumber"
      ]
    },
    {
      "page": "dbGetPlantTillerNumber",
      "title": "Estimation of tiller number per plant",
      "topics": [
        "dbGetPlantTillerNumber"
      ]
    },
    {
      "page": "dbGetSites",
      "title": "Get site into expDB",
      "topics": [
        "dbGetSites"
      ]
    },
    {
      "page": "dbGetSource",
      "title": "Get source from expDB",
      "topics": [
        "dbGetSource"
      ]
    },
    {
      "page": "dbGetTraits",
      "title": "Get trait list",
      "topics": [
        "dbGetTraits"
      ]
    },
    {
      "page": "dbGetTrials",
      "title": "Get trials by a groups of conditions.",
      "topics": [
        "dbGetTrials"
      ]
    },
    {
      "page": "dbGetWeather",
      "title": "Get weather records from expDB",
      "topics": [
        "dbGetWeather"
      ]
    },
    {
      "page": "dbGetZadoksStage",
      "title": "Obtain the key phenology stage",
      "topics": [
        "dbGetZadoksStage"
      ]
    },
    {
      "page": "dbImportXLSX",
      "title": "Import data from excel file",
      "topics": [
        "dbImportXLSX"
      ]
    },
    {
      "page": "dbInsertUpdateByRow",
      "title": "Insert new rows or update existing rows to a specific table according to a specific column (unique) by each row",
      "topics": [
        "dbInsertUpdateByRow"
      ]
    },
    {
      "page": "dbListTrials",
      "title": "List all trials",
      "topics": [
        "dbListTrials"
      ]
    },
    {
      "page": "expdbConnect",
      "title": "Connect to expDB",
      "topics": [
        "expdbConnect"
      ]
    },
    {
      "page": "expdbCreateDB",
      "title": "create to expDB",
      "topics": [
        "expdbCreateDB"
      ]
    },
    {
      "page": "expdbDisconnect",
      "title": "Didconnect to expDB",
      "topics": [
        "expdbDisconnect"
      ]
    },
    {
      "page": "getIdByUniqueIndex",
      "title": "Get index id by unique_columns.",
      "topics": [
        "getIdByUniqueIndex"
      ]
    },
    {
      "page": "harvestQuadratDetail",
      "title": "Process quadrat (detail) harvestQuadratDetail",
      "topics": [
        "harvestQuadratDetail"
      ]
    }
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